CDS
Accession Number | TCMCG035C00166 |
gbkey | CDS |
Protein Id | XP_021625279.1 |
Location | complement(join(2236144..2236239,2237544..2237752,2238397..2238438,2238747..2238907,2239071..2239142,2239251..2239432,2247163..2247286,2247427..2247491,2248533..2248732,2248824..2249076,2250730..2250813,2250903..2250960,2252240..2252287,2252488..2252645,2252911..2252961,2253043..2253116,2253240..2253315,2254086..2254130,2254222..2254273,2254383..2254509,2254638..2254830,2255016..2255099,2255203..2255257,2259990..2260210,2263750..2263863,2264051..2264114,2269984..2270084,2270202..2270343,2270603..2270804,2275578..2275671,2275773..2275946)) |
Gene | LOC110624442 |
GeneID | 110624442 |
Organism | Manihot esculenta |
Protein
Length | 1206aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA394209 |
db_source | XM_021769587.1 |
Definition | DENN domain and WD repeat-containing protein SCD1 isoform X1 [Manihot esculenta] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGGCACGGATCTTCGAGTATTTTGTGGTGTGTGGGCTGGGTCCAGAGCTTCGAACCTTGGATGGGAACAAAGGGTACCATGGAAAGGGAGAAATGTATCTGCCTTCTCTGCTCGACCAATATCCTCCTGACGATCACTCTCTGTATCCTCCTCCTCCTCCCCAGCTCCCCACCTGTGTTCTGCCTGCTGGTGTGGAGTTCTACTCTTCTGGATTTGATTCTAATGATGACTCTACTTTTCCACGGAGCTATCCTATCGTCTTAACTGAGGGTGATGGATCAAAAATTTATGTTACTTGCATTGCTTTTCGGGATCCAGTTAGTGAGGATATTGCTGAAGCTTACCGTATACCAGCAAATTCATTTGCTGATAAATGTATCTGTCTTGTATCTCGCTCACCTAGTTTCCGTATCCTTCGAAATGCACTGGAAGAGATATTTGCACTATGCTTTTCTCCCAGCGGAAGCAGCAAGCCATTATGGGATGTTATAGCACACATGGTTTCCAATGTACCTTTGCCTACACCTGGAAAGGATCGAGTTTTATTTGCTATTGAGAATTGCCTACTCTCTGTGGAGGCTCCACCAAAAGAAGGGCTTCCTCATGTTGATATATCTTTTCAGCCACTGGTACAATGCTTGGATGTTGATAACTTAATCAAATTTTTTACTGCTGTGTTGCTTGAGAGGAGGATTTTACTTCGATCCAATAAGTATTCTATTTTAACTCTTGTATCAGAAGGCATATGCCATTTAATTTATCCTTTTAGGTGGCAGCATGTCTACATTCCATTACTATTTTTCAGTGGAGTAGACTACATCGATGCTCCAACACCATATATGATGGGCCTTCATTCCGGTGTTGATACATCTAATCTTGCAATGGATGGCGTAGTGGTTGTAGACCTTGATTATAATCAAATCAGCACAACAGAGGAAATACCTCCTATTCCAGAGCCAGAATTAAGTTCTTTGCGTAGTGACATATTGAAGCTATTATTCCCTAATGTCATGGGTATAGATCAAGTGAAGGCCGGTGTGTTTAGTTCCTCTGTGCAATATTGTAAAGGTTACAACAAGCCTTGGGGAGAGGACCACGACCTCCAACTTAGGTTAATATTCTTAAAGTTCTTTGCATCAATTTTAGGTGGCTACCGCAATTTCATTGAAAATGGTGCAACACAGGTCTTTAATGCTCAAGCATTTTTGAGAAAGCGCTCTCGCTCAACAAACCAGCCAACAGAGCCCATGATAACGCAGTTTTTGGACACTCATGGTTTCTTGGATTATCTAGAGAGAGCAGGAGGTTCCAATGAAAACAACATTAATCTCCTTGACAAGTTACAAGATGCAATTGGAAGGGGTCAAAATCCTATTTCAATTCTTCCCATGTCATTGGAAGAGCCTGAGTTTATAACCATATCAGATGATGATGTGGGAGCAGGAGCAGGTGCCAAATATACCTATGATAGGTTTCCTTCAAACATTAGATCAGAAGAGCAAGAAGAGAAAAGGAAGCAGATTCTTGCTGCAGCAAGTGGAGCTTTCGAGTACATAAAGCATGCTCCTAGCTCACCTTCTGTGCAAGTGGGTAAGGATTCTCTTAGTCCAATGGAGAGAGCTGCAGAAAGGGAGCGCATGGTTTTGGACATTAAAGTTAAGCTGCAGGGTTTGTGGCTGCGCCTTCTAAAACTGGGAGCTACTGATGATCCACTTTCTTCATTTGAATATGGCACAATCCTTGCACTGATTGAGTCTGATGCAGAGGGAATTGGTGGCAGTGGGTTTGTTGAATGTATCAGCGAGCACATACACTCAGGATGGCACTGTCAGTTGACTGATGAACAGTTTATTGCAGTGAAAGAGTTGCTTAAAACAGCAATTAATCGTGCAACATCCCGGAATGATGTGTCAACCATTAGAGATGCCCTTGAAGTGTCCGCTGAGATGTATAAGAAGGATGCTAATAATGTTTCTGACTATGTCCAGCGCCATCTAATTTCTCTGTCCATTTGGGAGGAGCTAAGGTTCTGGGAAGGCTACTTTGACCATCTTATGGAGCATTCTTCAAGCAAGTCAACTAATTATGCAGCTTTAGTCACAACCCAACTAATTCTGCTGGCATCTCACATGGCTGGATTGGGACTTTCTGATACTGATGCTTGGTACATGGTTGAGACTATAGCAGAGAGGAACAATATTGGATACAAGCAGCTTATAAAACTTAGAGGATTTCTTTCACATATACAACTTCGTATTGGTTACTGGGGAACCTCTTTGGTTAAGGCCCAATCTATGTCATCTCATGGGTTGTCTTCCCCTCGTCTTTTAGACGTTACAGATGAGAATCAGCAACCTGCTGAGGCATCTGGTGTAGGCAGGAGTTGGGTGCAAAGCATGTTTAGCAGAGATTCATCAAGAGTAAACTCTTTTGCTCGTGTTCAACGATGGACATCTGAAAGCACTTTAACTGCAAAAGAGAATGGGACTTCTCGGAAACAAGATTTATCTGCTGCTGGGCAAAAGAAAATTCCAACCAACATCCGTATACTCAGGGGTCATAGTGGTGCTATTACTGCGTTGCATTGTGTAACTAAAAGGGAGGTGTGGGATCTGGTGGGTGACCGTGAAGATGCAGGATTCTTTATCAGTGGAAGCACAGATTGCATGGTTAAGATATGGGATCCTAGCATTCGTGGTTCCGAACTTCGGGCGACTTTGAAAGGGCATAGAAGAACTGTTCGTGCTATAAGTTCTGATCGAGGAAAGGTGGTATCAGGATCTGATGATCAGTCTGTTATTGTGTGGGATAAGCAAACATCTCAGCTTTTAGAAGAGCTGAAGGGCCATGATGCGCAGGTCAGCTGTGTTCGTATGCTGTCAGGTGAGCGTGTCCTTACTGCTGCCCATGATGGAACTCTGAAGATGTGGGATGTTCGAACTGATACCTGCGTAGCAACAGTTGGTCGCTGCTCTAGTGCAGTCCTGTGTATGGAGTATGATGATTCCACTGGTATCCTGGCTGCTGCTGGTAGAGATGCAGTTGCGAACATCTGGGATATTCGTGCTGGTAGGCAAATGCACAAGCTGTTAGGACATACAAAATGGATACGGTCAATTAGAATGGTTGGAGATACATTGGTTACTGGTAGTGATGATTGGACTGCAAGAGTGTGGTCTGTTTCACGAGGAACATGTGATGCTGTTCTAGCCTGCCATGCTGGTCCAATTTTATGCGTCGAGTATTCCACGTTAGACAGGGGAATAATAACAGGTTCAACTGATGGGCTGCTCCGATTTTGGGAGAATGAGGAAGGAGGTATAAGGTGTGTGAAGAATGTAACCATTCATAATGCTGCTATATTATCTATCAATGCTGGGGAGCACTGGTTAGGAATTGGAGCAGCCGATAATTCCATGTCTCTGTTCCAACGACCTCAAGAACGACTCGGTGGCCTCTCTGGCACTGGCTCAAAAATGTCTGGGTGGCAGCTTTACAGAACGCCACAAAAGACCGTTGCTATGGTGAAATGTGTAGCCTCTGATCTTGAAAGGAAAAGGATATGCAGCGGGGGTCGAAATGGAGTTCTCAGGTTATGGGAAGCAACCATCAACATTTAA |
Protein: MARIFEYFVVCGLGPELRTLDGNKGYHGKGEMYLPSLLDQYPPDDHSLYPPPPPQLPTCVLPAGVEFYSSGFDSNDDSTFPRSYPIVLTEGDGSKIYVTCIAFRDPVSEDIAEAYRIPANSFADKCICLVSRSPSFRILRNALEEIFALCFSPSGSSKPLWDVIAHMVSNVPLPTPGKDRVLFAIENCLLSVEAPPKEGLPHVDISFQPLVQCLDVDNLIKFFTAVLLERRILLRSNKYSILTLVSEGICHLIYPFRWQHVYIPLLFFSGVDYIDAPTPYMMGLHSGVDTSNLAMDGVVVVDLDYNQISTTEEIPPIPEPELSSLRSDILKLLFPNVMGIDQVKAGVFSSSVQYCKGYNKPWGEDHDLQLRLIFLKFFASILGGYRNFIENGATQVFNAQAFLRKRSRSTNQPTEPMITQFLDTHGFLDYLERAGGSNENNINLLDKLQDAIGRGQNPISILPMSLEEPEFITISDDDVGAGAGAKYTYDRFPSNIRSEEQEEKRKQILAAASGAFEYIKHAPSSPSVQVGKDSLSPMERAAERERMVLDIKVKLQGLWLRLLKLGATDDPLSSFEYGTILALIESDAEGIGGSGFVECISEHIHSGWHCQLTDEQFIAVKELLKTAINRATSRNDVSTIRDALEVSAEMYKKDANNVSDYVQRHLISLSIWEELRFWEGYFDHLMEHSSSKSTNYAALVTTQLILLASHMAGLGLSDTDAWYMVETIAERNNIGYKQLIKLRGFLSHIQLRIGYWGTSLVKAQSMSSHGLSSPRLLDVTDENQQPAEASGVGRSWVQSMFSRDSSRVNSFARVQRWTSESTLTAKENGTSRKQDLSAAGQKKIPTNIRILRGHSGAITALHCVTKREVWDLVGDREDAGFFISGSTDCMVKIWDPSIRGSELRATLKGHRRTVRAISSDRGKVVSGSDDQSVIVWDKQTSQLLEELKGHDAQVSCVRMLSGERVLTAAHDGTLKMWDVRTDTCVATVGRCSSAVLCMEYDDSTGILAAAGRDAVANIWDIRAGRQMHKLLGHTKWIRSIRMVGDTLVTGSDDWTARVWSVSRGTCDAVLACHAGPILCVEYSTLDRGIITGSTDGLLRFWENEEGGIRCVKNVTIHNAAILSINAGEHWLGIGAADNSMSLFQRPQERLGGLSGTGSKMSGWQLYRTPQKTVAMVKCVASDLERKRICSGGRNGVLRLWEATINI |